-
recipe
bioconductor-mirintegrator
Integrating microRNA expression into signaling pathways for pathway analysis
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/mirIntegrator.html
- License
GPL (>=3)
- Recipe
- Links
biotools: mirintegrator, doi: 10.1038/srep29251
Tools for augmenting signaling pathways to perform pathway analysis of microRNA and mRNA expression levels.
-
package
bioconductor-mirintegrator
¶ -
- Versions
1.20.0-0
,1.18.0-0
,1.16.0-0
,1.14.0-1
,1.12.0-0
,1.10.0-0
,1.8.0-0
- Depends
bioconductor-annotationdbi
>=1.52.0,<1.53.0
bioconductor-graph
>=1.68.0,<1.69.0
bioconductor-org.hs.eg.db
>=3.12.0,<3.13.0
bioconductor-rgraphviz
>=2.34.0,<2.35.0
bioconductor-rontotools
>=2.18.0,<2.19.0
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-mirintegrator
and update with:
conda update bioconductor-mirintegrator
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-mirintegrator:<tag>
(see bioconductor-mirintegrator/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-mirintegrator/README.html)