recipe bioconductor-mirnapath

This package provides pathway enrichment techniques for miRNA expression data. Specifically, the set of methods handles the many-to-many relationship between miRNAs and the multiple genes they are predicted to target (and thus affect.) It also handles the gene-to-pathway relationships separately. Both steps are designed to preserve the additive effects of miRNAs on genes, many miRNAs affecting one gene, one miRNA affecting multiple genes, or many miRNAs affecting many genes.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/miRNApath.html

License

LGPL-2.1

Recipe

/bioconductor-mirnapath/meta.yaml

Links

biotools: mirnapath

package bioconductor-mirnapath

(downloads) docker_bioconductor-mirnapath

Versions

1.44.0-0, 1.42.0-0, 1.40.0-0, 1.38.0-0, 1.36.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mirnapath

and update with:

conda update bioconductor-mirnapath

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mirnapath:<tag>

(see bioconductor-mirnapath/tags for valid values for <tag>)