recipe bioconductor-mmdiffbamsubset

Subset of BAM files, including WT_2.bam, Null_2.bam, Resc_2.bam, Input.bam from the “Cfp1” experiment (see Clouaire et al., Genes Dev. 2012). Data is available under ArrayExpress accession numbers E-ERAD-79. Additionally, corresponding subset of peaks called by MACS

Homepage

https://bioconductor.org/packages/3.9/data/experiment/html/MMDiffBamSubset.html

License

LGPL

Recipe

/bioconductor-mmdiffbamsubset/meta.yaml

package bioconductor-mmdiffbamsubset

(downloads) docker_bioconductor-mmdiffbamsubset

Versions

1.20.0-0, 1.18.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mmdiffbamsubset

and update with:

conda update bioconductor-mmdiffbamsubset

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mmdiffbamsubset:<tag>

(see bioconductor-mmdiffbamsubset/tags for valid values for <tag>)