recipe bioconductor-mousefm

In-silico methods for genetic finemapping in inbred mice

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/MouseFM.html

License:

GPL-3

Recipe:

/bioconductor-mousefm/meta.yaml

This package provides methods for genetic finemapping in inbred mice by taking advantage of their very high homozygosity rate (>95%).

package bioconductor-mousefm

Versions:

1.8.0-0,  1.0.0-2,  1.0.0-1

Depends:

• bioconductor-biomart >=2.54.0,<2.55.0

• bioconductor-genomeinfodb >=1.34.0,<1.35.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• r-base >=4.2,<4.3.0a0

• r-curl

• r-data.table

• r-dplyr

• r-ggplot2

• r-gtools

• r-httr

• r-jsonlite

• r-reshape2

• r-rlist

• r-scales

• r-tidyr

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-mousefm

and update with:

conda update bioconductor-mousefm

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mousefm:<tag>

(see bioconductor-mousefm/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-mousefm/README.html)