- recipe bioconductor-mousethymusageing
Single-cell Transcriptomics Data of the Ageing Mouse Thymus
- Homepage
https://bioconductor.org/packages/3.14/data/experiment/html/MouseThymusAgeing.html
- License
GPL-3
- Recipe
This package provides data access to counts matrices and meta-data for single-cell RNA sequencing data of thymic epithlial cells across mouse ageing using SMARTseq2 and 10X Genommics chemistries. Access is provided as a data package via ExperimentHub. It is designed to facilitate the re-use of data from Baran-Gale _et al._ in a consistent format that includes relevant and informative meta-data.
- package bioconductor-mousethymusageing¶
-
- Versions
1.2.0-0
,1.0.0-0
- Depends
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-experimenthub
>=2.2.0,<2.3.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
bioconductor-singlecellexperiment
>=1.16.0,<1.17.0
bioconductor-summarizedexperiment
>=1.24.0,<1.25.0
curl
>=7.79.1,<8.0a0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-mousethymusageing
and update with:
conda update bioconductor-mousethymusageing
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-mousethymusageing:<tag>
(see bioconductor-mousethymusageing/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-mousethymusageing/README.html)