- recipe bioconductor-mudata
Serialization for MultiAssayExperiment Objects
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/MuData.html
- License:
GPL-3
- Recipe:
Save MultiAssayExperiments to h5mu files supported by muon and mudata. Muon is a Python framework for multimodal omics data analysis. It uses an HDF5-based format for data storage.
- package bioconductor-mudata¶
-
- Versions:
1.2.0-0
- Depends:
bioconductor-delayedarray
>=0.24.0,<0.25.0
bioconductor-multiassayexperiment
>=1.24.0,<1.25.0
bioconductor-rhdf5
>=2.42.0,<2.43.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
bioconductor-singlecellexperiment
>=1.20.0,<1.21.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-mudata
and update with:
conda update bioconductor-mudata
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-mudata:<tag>
(see bioconductor-mudata/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-mudata/README.html)