recipe bioconductor-multidataset

Implementation of the BRGE’s (Bioinformatic Research Group in Epidemiology from Center for Research in Environmental Epidemiology) MultiDataSet and ResultSet. MultiDataSet is designed for integrating multi omics data sets and ResultSet is a container for omics results. This package contains base classes for MEAL and rexposome packages.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/MultiDataSet.html

License

file LICENSE

Recipe

/bioconductor-multidataset/meta.yaml

Links

biotools: multidataset

package bioconductor-multidataset

Versions

1.10.0-0, 1.8.0-0, 1.6.0-0, 1.4.0-0

Depends

• bioconductor-biobase >=2.42.0,<2.43.0

• bioconductor-biocgenerics >=0.28.0,<0.29.0

• bioconductor-genomicranges >=1.34.0,<1.35.0

• bioconductor-iranges >=2.16.0,<2.17.0

• bioconductor-limma >=3.38.0,<3.39.0

• bioconductor-s4vectors >=0.20.0,<0.21.0

• bioconductor-summarizedexperiment >=1.12.0,<1.13.0

• r-base >=3.5.1,<3.5.2.0a0

• r-ggplot2

• r-ggrepel

• r-qqman

Required By

• bioconductor-meal

• bioconductor-omicrexposome

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-multidataset

and update with:

conda update bioconductor-multidataset

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-multidataset:<tag>

(see bioconductor-multidataset/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-multidataset/README.html)