recipe bioconductor-multidataset

Implementation of MultiDataSet and ResultSet

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/MultiDataSet.html

License:

file LICENSE

Recipe:

/bioconductor-multidataset/meta.yaml

Links:

biotools: multidataset

Implementation of the BRGE's (Bioinformatic Research Group in Epidemiology from Center for Research in Environmental Epidemiology) MultiDataSet and ResultSet. MultiDataSet is designed for integrating multi omics data sets and ResultSet is a container for omics results. This package contains base classes for MEAL and rexposome packages.

package bioconductor-multidataset

Versions:

1.22.0-0,  1.20.0-0,  1.18.1-0,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.0-0,  1.8.0-0, 

1.22.0-0,  1.20.0-0,  1.18.1-0,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.0-0,  1.8.0-0,  1.6.0-0,  1.4.0-0

Depends:

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-biocgenerics >=0.40.0,<0.41.0

• bioconductor-genomicranges >=1.46.0,<1.47.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-limma >=3.50.0,<3.51.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• bioconductor-summarizedexperiment >=1.24.0,<1.25.0

• r-base >=4.1,<4.2.0a0

• r-ggplot2

• r-ggrepel

• r-qqman

Required By:

• bioconductor-ropls

• bioconductor-meal

• bioconductor-biosigner

• bioconductor-omicrexposome

• r-intlim

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-multidataset

and update with:

conda update bioconductor-multidataset

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-multidataset:<tag>

(see bioconductor-multidataset/tags for valid values for <tag>)

Download stats

Link to this page

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