bioconductor-mzr

downloads

mzR provides a unified API to the common file formats and parsers available for mass spectrometry data. It comes with a wrapper for the ISB random access parser for mass spectrometry mzXML, mzData and mzML files. The package contains the original code written by the ISB, and a subset of the proteowizard library for mzML and mzIdentML. The netCDF reading code has previously been used in XCMS.

Home http://bioconductor.org/packages/release/bioc/html/mzR.html
Versions 2.4.1, 2.6.3
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-mzr

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mzr

and update with:

conda update bioconductor-mzr

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-mzr.