recipe bioconductor-mzr

mzR provides a unified API to the common file formats and parsers available for mass spectrometry data. It comes with a wrapper for the ISB random access parser for mass spectrometry mzXML, mzData and mzML files. The package contains the original code written by the ISB, and a subset of the proteowizard library for mzML and mzIdentML. The netCDF reading code has previously been used in XCMS.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/mzR.html

License

Artistic-2.0

Recipe

/bioconductor-mzr/meta.yaml

Links

biotools: mzr

package bioconductor-mzr

(downloads) docker_bioconductor-mzr

Versions

2.18.0-1, 2.16.2-1, 2.16.2-0, 2.16.0-0, 2.12.0-1, 2.10.0-0, 2.6.3-1, 2.6.3-0, 2.4.1-1

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-mzr

and update with:

conda update bioconductor-mzr

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-mzr:<tag>

(see bioconductor-mzr/tags for valid values for <tag>)