recipe bioconductor-nanostringdiff

This Package utilizes a generalized linear model(GLM) of the negative binomial family to characterize count data and allows for multi-factor design. NanoStrongDiff incorporate size factors, calculated from positive controls and housekeeping controls, and background level, obtained from negative controls, in the model framework so that all the normalization information provided by NanoString nCounter Analyzer is fully utilized.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/NanoStringDiff.html

License

GPL

Recipe

/bioconductor-nanostringdiff/meta.yaml

package bioconductor-nanostringdiff

(downloads) docker_bioconductor-nanostringdiff

Versions

1.14.0-1, 1.12.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-nanostringdiff

and update with:

conda update bioconductor-nanostringdiff

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-nanostringdiff:<tag>

(see bioconductor-nanostringdiff/tags for valid values for <tag>)