recipe bioconductor-nanotubes

Mouse nanotube CAGE data

Homepage

https://bioconductor.org/packages/3.12/data/experiment/html/nanotubes.html

License

GPL-3

Recipe

/bioconductor-nanotubes/meta.yaml

Cap Analysis of Gene Expression (CAGE) data from "Identification of Gene Transcription Start Sites and Enhancers Responding to Pulmonary Carbon Nanotube Exposure in Vivo" by Bornholdt et al. supplied as CAGE Transcription Start Sites (CTSSs).

package bioconductor-nanotubes

Versions

1.6.0-0,  1.5.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1

Depends

• curl >=7.71.1,<8.0a0

• r-base >=4.0,<4.1.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-nanotubes

and update with:

conda update bioconductor-nanotubes

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-nanotubes:<tag>

(see bioconductor-nanotubes/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-nanotubes/README.html)