- recipe bioconductor-nebulosa
Single-Cell Data Visualisation Using Kernel Gene-Weighted Density Estimation
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/Nebulosa.html
- License:
GPL-3
- Recipe:
This package provides a enhanced visualization of single-cell data based on gene-weighted density estimation. Nebulosa recovers the signal from dropped-out features and allows the inspection of the joint expression from multiple features (e.g. genes). Seurat and SingleCellExperiment objects can be used within Nebulosa.
- package bioconductor-nebulosa¶
-
- Versions:
1.8.0-0
,1.4.0-0
,1.2.0-0
,1.0.2-0
,1.0.0-1
- Depends:
bioconductor-singlecellexperiment
>=1.20.0,<1.21.0
bioconductor-summarizedexperiment
>=1.28.0,<1.29.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-nebulosa
and update with:
conda update bioconductor-nebulosa
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-nebulosa:<tag>
(see bioconductor-nebulosa/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-nebulosa/README.html)