recipe bioconductor-ntw

Predict gene network using an Ordinary Differential Equation (ODE) based method

Homepage

https://bioconductor.org/packages/3.11/bioc/html/NTW.html

License

GPL-2

Recipe

/bioconductor-ntw/meta.yaml

Links

biotools: ntw, doi: 10.1093/bioinformatics/btq629

This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.

package bioconductor-ntw

Versions

1.38.0-0,  1.36.0-0,  1.34.0-1,  1.34.0-0,  1.32.0-0,  1.30.0-0,  1.28.0-0,  1.26.0-0

Depends

• r-base >=4.0,<4.1.0a0

• r-mvtnorm

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ntw

and update with:

conda update bioconductor-ntw

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ntw:<tag>

(see bioconductor-ntw/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ntw/README.html)