- recipe bioconductor-nullranges
Generation of null ranges via bootstrapping or covariate matching
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/nullranges.html
- License:
GPL-3
- Recipe:
Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrap samples of ranges (using the block bootstrap framework of Bickel et al 2010), or sets of control ranges that are matched across one or more covariates. nullranges is designed to be inter-operable with other packages for analysis of genomic overlap enrichment, including the plyranges Bioconductor package.
- package bioconductor-nullranges¶
-
- Versions:
1.4.0-0
,1.0.0-0
- Depends:
bioconductor-genomeinfodb
>=1.34.0,<1.35.0
bioconductor-genomicranges
>=1.50.0,<1.51.0
bioconductor-interactionset
>=1.26.0,<1.27.0
bioconductor-iranges
>=2.32.0,<2.33.0
bioconductor-plyranges
>=1.18.0,<1.19.0
bioconductor-s4vectors
>=0.36.0,<0.37.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-nullranges
and update with:
conda update bioconductor-nullranges
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-nullranges:<tag>
(see bioconductor-nullranges/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-nullranges/README.html)