recipe bioconductor-nullrangesdata

ExperimentHub datasets for the nullranges package

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/nullrangesData.html

License:

GPL-3

Recipe:

/bioconductor-nullrangesdata/meta.yaml

Provides datasets for the nullranges package vignette, in particular example datasets for DNase hypersensitivity sites (DHS), CTCF binding sites, and CTCF genomic interactions. These are used to demonstrate generation of null hypothesis feature sets, either through block bootstrapping or matching, in the nullranges vignette. For more details, see the data object man pages, and the R scripts for object construction provided within the package.

package bioconductor-nullrangesdata

Versions:

1.4.0-0,  1.0.0-1,  1.0.0-0

Depends:

• bioconductor-data-packages >=20221109

• bioconductor-experimenthub >=2.6.0,<2.7.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-interactionset >=1.26.0,<1.27.0

• curl

• r-base >=4.2,<4.3.0a0

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-nullrangesdata

and update with:

conda update bioconductor-nullrangesdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-nullrangesdata:<tag>

(see bioconductor-nullrangesdata/tags for valid values for <tag>)

Download stats

Link to this page

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