recipe bioconductor-nxtirfdata

Data for NxtIRF

Homepage:

https://bioconductor.org/packages/3.14/data/experiment/html/NxtIRFdata.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-nxtirfdata/meta.yaml

NxtIRFdata is a companion package for NxtIRF, which is an IRFinder- based R package for Intron Retention and Alternative Splicing quantitation for RNA-seq BAM files. NxtIRFdata contains Mappability files required for the generation of human and mouse references. NxtIRFdata also contains a synthetic genome reference and example BAM files used to test NxtIRF. BAM files are based on 6 samples from the Leucegene dataset provided by NCBI Gene Expression Omnibus under accession number GSE67039.

package bioconductor-nxtirfdata

(downloads) docker_bioconductor-nxtirfdata

Versions:

1.0.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-nxtirfdata

and update with:

conda update bioconductor-nxtirfdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-nxtirfdata:<tag>

(see bioconductor-nxtirfdata/tags for valid values for <tag>)

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