Package Recipe 'bioconductor-oligoclasses'

recipe bioconductor-oligoclasses

Classes for high-throughput arrays supported by oligo and crlmm

Homepage: https://bioconductor.org/packages/3.12/bioc/html/oligoClasses.html
License: GPL (>= 2)
Recipe: /bioconductor-oligoclasses/meta.yaml
Links: biotools: oligoclasses, doi: 10.1038/nmeth.3252

This package contains class definitions, validity checks, and initialization methods for classes used by the oligo and crlmm packages.

package bioconductor-oligoclasses¶

Versions

1.52.0-0, 1.50.0-0, 1.48.0-0, 1.46.0-1, 1.44.0-0, 1.42.0-0, 1.40.0-0, 1.38.0-0

Depends

bioconductor-affyio >=1.60.0,<1.61.0
bioconductor-biobase >=2.50.0,<2.51.0
bioconductor-biocgenerics >=0.36.0,<0.37.0
bioconductor-biostrings >=2.58.0,<2.59.0
bioconductor-genomicranges >=1.42.0,<1.43.0
bioconductor-iranges >=2.24.0,<2.25.0
bioconductor-s4vectors >=0.28.0,<0.29.0
bioconductor-summarizedexperiment >=1.20.0,<1.21.0
r-base >=4.0,<4.1.0a0
r-biocmanager
r-dbi
r-ff
r-foreach
r-rsqlite

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-oligoclasses

and update with:

conda update bioconductor-oligoclasses

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-oligoclasses:<tag>

(see bioconductor-oligoclasses/tags for valid values for <tag>)

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-oligoclasses/README.html)