Package Recipe 'bioconductor-oligoclasses'

recipe bioconductor-oligoclasses

Classes for high-throughput arrays supported by oligo and crlmm

Homepage:: https://bioconductor.org/packages/3.14/bioc/html/oligoClasses.html
License:: GPL (>= 2)
Recipe:: /bioconductor-oligoclasses/meta.yaml
Links:: biotools: oligoclasses, doi: 10.1038/nmeth.3252

This package contains class definitions, validity checks, and initialization methods for classes used by the oligo and crlmm packages.

package bioconductor-oligoclasses¶

Versions:

1.56.0-0, 1.54.0-0, 1.52.0-1, 1.52.0-0, 1.50.0-0, 1.48.0-0, 1.46.0-1, 1.44.0-0, 1.42.0-0,

1.56.0-0, 1.54.0-0, 1.52.0-1, 1.52.0-0, 1.50.0-0, 1.48.0-0, 1.46.0-1, 1.44.0-0, 1.42.0-0, 1.40.0-0, 1.38.0-0

Depends:

bioconductor-affyio >=1.64.0,<1.65.0
bioconductor-biobase >=2.54.0,<2.55.0
bioconductor-biocgenerics >=0.40.0,<0.41.0
bioconductor-biostrings >=2.62.0,<2.63.0
bioconductor-genomicranges >=1.46.0,<1.47.0
bioconductor-iranges >=2.28.0,<2.29.0
bioconductor-s4vectors >=0.32.0,<0.33.0
bioconductor-summarizedexperiment >=1.24.0,<1.25.0
r-base >=4.1,<4.2.0a0
r-biocmanager
r-dbi
r-ff
r-foreach
r-rsqlite

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-oligoclasses

and update with:

conda update bioconductor-oligoclasses

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-oligoclasses:<tag>

(see bioconductor-oligoclasses/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-oligoclasses/README.html)