recipe bioconductor-omadb

R wrapper for the OMA REST API

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/OmaDB.html

License:

GPL-3

Recipe:

/bioconductor-omadb/meta.yaml

A package for the orthology prediction data download from OMA database.

package bioconductor-omadb

Versions:

2.14.0-0,  2.10.0-0,  2.8.0-0,  2.6.1-0,  2.6.0-0,  2.5.0-0,  2.4.0-0,  2.2.0-0,  2.0.0-1, 

2.14.0-0,  2.10.0-0,  2.8.0-0,  2.6.1-0,  2.6.0-0,  2.5.0-0,  2.4.0-0,  2.2.0-0,  2.0.0-1,  1.2.0-0

Depends:

• bioconductor-biostrings >=2.66.0,<2.67.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-topgo >=2.50.0,<2.51.0

• r-ape

• r-base >=4.2,<4.3.0a0

• r-httr >=1.2.1

• r-jsonlite

• r-plyr >=1.8.4

Required By:

• bioconductor-phyloprofile

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-omadb

and update with:

conda update bioconductor-omadb

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-omadb:<tag>

(see bioconductor-omadb/tags for valid values for <tag>)

Download stats

Link to this page

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