recipe bioconductor-omicsprint

Cross omic genetic fingerprinting

Homepage

https://bioconductor.org/packages/3.11/bioc/html/omicsPrint.html

License

GPL (>= 2)

Recipe

/bioconductor-omicsprint/meta.yaml

omicsPrint provides functionality for cross omic genetic fingerprinting, for example, to verify sample relationships between multiple omics data types, i.e. genomic, transcriptomic and epigenetic (DNA methylation).

package bioconductor-omicsprint

Versions

1.8.0-0,  1.6.0-0,  1.4.0-1,  1.2.1-0,  1.2.0-0

Depends

• bioconductor-multiassayexperiment >=1.14.0,<1.15.0

• bioconductor-raggedexperiment >=1.12.0,<1.13.0

• bioconductor-summarizedexperiment >=1.18.0,<1.19.0

• r-base >=4.0,<4.1.0a0

• r-mass

• r-matrixstats

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-omicsprint

and update with:

conda update bioconductor-omicsprint

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-omicsprint:<tag>

(see bioconductor-omicsprint/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-omicsprint/README.html)