- recipe bioconductor-opencyto
Hierarchical Gating Pipeline for flow cytometry data
- Homepage
https://bioconductor.org/packages/3.14/bioc/html/openCyto.html
- License
file LICENSE
- Recipe
This package is designed to facilitate the automated gating methods in sequential way to mimic the manual gating strategy.
- package bioconductor-opencyto¶
-
- Versions
2.6.0-1
,2.6.0-0
,2.4.0-0
,2.2.0-2
,2.2.0-1
,2.2.0-0
,2.0.0-0
,1.24.0-0
,1.22.2-0
,2.6.0-1
,2.6.0-0
,2.4.0-0
,2.2.0-2
,2.2.0-1
,2.2.0-0
,2.0.0-0
,1.24.0-0
,1.22.2-0
,1.20.1-0
- Depends
bioconductor-biobase
>=2.54.0,<2.55.0
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-flowclust
>=3.32.0,<3.33.0
bioconductor-flowcore
>=2.6.0,<2.7.0
bioconductor-flowstats
>=4.6.0,<4.7.0
bioconductor-flowviz
>=1.58.0,<1.59.0
bioconductor-flowworkspace
>=4.6.0,<4.7.0
bioconductor-graph
>=1.72.0,<1.73.0
bioconductor-ncdfflow
>=2.40.0,<2.41.0
bioconductor-rbgl
>=1.70.0,<1.71.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=10.3.0
liblapack
>=3.8.0,<4.0a0
libstdcxx-ng
>=10.3.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-opencyto
and update with:
conda update bioconductor-opencyto
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-opencyto:<tag>
(see bioconductor-opencyto/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-opencyto/README.html)