recipe bioconductor-pchicdata

Subsets of Promoter Capture Hi-C data conveniently packaged for Chicago users. Data includes interactions detected for chromosomes 20 and 21 in GM12878 cells and for chromosomes 18 and 19 in mESC.

Homepage

https://bioconductor.org/packages/3.9/data/experiment/html/PCHiCdata.html

License

Artistic-2.0

Recipe

/bioconductor-pchicdata/meta.yaml

package bioconductor-pchicdata

(downloads) docker_bioconductor-pchicdata

Versions

1.12.0-1, 1.12.0-0, 1.10.0-0, 1.8.0-0, 1.6.0-1, 1.6.0-0, 1.4.0-0, 1.2.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pchicdata

and update with:

conda update bioconductor-pchicdata

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pchicdata:<tag>

(see bioconductor-pchicdata/tags for valid values for <tag>)