recipe bioconductor-pdatk

Pancreatic Ductal Adenocarcinoma Tool-Kit

Homepage

https://bioconductor.org/packages/3.13/bioc/html/PDATK.html

License

MIT + file LICENSE

Recipe

/bioconductor-pdatk/meta.yaml

Pancreatic ductal adenocarcinoma (PDA) has a relatively poor prognosis and is one of the most lethal cancers. Molecular classification of gene expression profiles holds the potential to identify meaningful subtypes which can inform therapeutic strategy in the clinical setting. The Pancreatic Cancer Adenocarcinoma Tool-Kit (PDATK) provides an S4 class-based interface for performing unsupervised subtype discovery, cross-cohort meta-clustering, gene-expression-based classification, and subsequent survival analysis to identify prognostically useful subtypes in pancreatic cancer and beyond.

package bioconductor-pdatk

(downloads) docker_bioconductor-pdatk

Versions

1.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pdatk

and update with:

conda update bioconductor-pdatk

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pdatk:<tag>

(see bioconductor-pdatk/tags for valid values for <tag>)

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