recipe bioconductor-ping

Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data

Homepage

https://bioconductor.org/packages/3.11/bioc/html/PING.html

License

Artistic-2.0

Recipe

/bioconductor-ping/meta.yaml

Links

biotools: ping

Probabilistic inference of ChIP-Seq using an empirical Bayes mixture model approach.

package bioconductor-ping

Versions

2.32.0-0,  2.30.0-0,  2.28.0-1,  2.26.0-0,  2.24.0-0,  2.22.0-0,  2.20.0-0

Depends

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• bioconductor-bsgenome >=1.56.0,<1.57.0

• bioconductor-genomicranges >=1.40.0,<1.41.0

• bioconductor-gviz >=1.32.0,<1.33.0

• bioconductor-iranges >=2.22.0,<2.23.0

• bioconductor-pics >=2.32.0,<2.33.0

• bioconductor-s4vectors >=0.26.0,<0.27.0

• libblas >=3.8.0,<4.0a0

• libgcc-ng >=7.3.0

• liblapack >=3.8.0,<3.9.0a0

• r-base >=4.0,<4.1.0a0

• r-fda

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ping

and update with:

conda update bioconductor-ping

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ping:<tag>

(see bioconductor-ping/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ping/README.html)