recipe bioconductor-ping

Probabilistic inference for Nucleosome Positioning with MNase-based or Sonicated Short-read Data

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/PING.html

License:

Artistic-2.0

Recipe:

/bioconductor-ping/meta.yaml

Links:

biotools: ping

Probabilistic inference of ChIP-Seq using an empirical Bayes mixture model approach.

package bioconductor-ping

Versions:

2.42.0-0,  2.38.0-2,  2.38.0-1,  2.38.0-0,  2.36.0-0,  2.34.0-1,  2.34.0-0,  2.32.0-0,  2.30.0-0, 

2.42.0-0,  2.38.0-2,  2.38.0-1,  2.38.0-0,  2.36.0-0,  2.34.0-1,  2.34.0-0,  2.32.0-0,  2.30.0-0,  2.28.0-1,  2.26.0-0,  2.24.0-0,  2.22.0-0,  2.20.0-0

Depends:

• bioconductor-biocgenerics >=0.44.0,<0.45.0

• bioconductor-bsgenome >=1.66.0,<1.67.0

• bioconductor-genomicranges >=1.50.0,<1.51.0

• bioconductor-gviz >=1.42.0,<1.43.0

• bioconductor-iranges >=2.32.0,<2.33.0

• bioconductor-pics >=2.42.0,<2.43.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• r-base >=4.2,<4.3.0a0

• r-fda

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-ping

and update with:

conda update bioconductor-ping

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ping:<tag>

(see bioconductor-ping/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-ping/README.html)