recipe bioconductor-plogo2

Plot Gene Ontology and KEGG pathway Annotation and Abundance

Homepage

https://bioconductor.org/packages/3.11/bioc/html/PloGO2.html

License

GPL-2

Recipe

/bioconductor-plogo2/meta.yaml

Functions for enrichment analysis and plotting gene ontology or KEGG pathway information for multiple data subsets at the same time. It also enables encorporating multiple conditions and abundance data.

package bioconductor-plogo2

Versions

1.0.0-0

Depends

• bioconductor-go.db >=3.11.0,<3.12.0

• bioconductor-gostats >=2.54.0,<2.55.0

• r-base >=4.0,<4.1.0a0

• r-httr

• r-lattice

• r-openxlsx

• r-xtable

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-plogo2

and update with:

conda update bioconductor-plogo2

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-plogo2:<tag>

(see bioconductor-plogo2/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-plogo2/README.html)