recipe bioconductor-pmm

The Parallel Mixed Model (PMM) approach is suitable for hit selection and cross-comparison of RNAi screens generated in experiments that are performed in parallel under several conditions. For example, we could think of the measurements or readouts from cells under RNAi knock-down, which are infected with several pathogens or which are grown from different cell lines.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/pmm.html

License

GPL-3

Recipe

/bioconductor-pmm/meta.yaml

Links

biotools: pmm, doi: 10.3929/ethz-a-010607487

package bioconductor-pmm

Versions

1.16.0-0, 1.14.0-0, 1.12.0-0, 1.10.0-0

Depends

• r-base >=3.5.1,<3.5.2.0a0

• r-lme4

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pmm

and update with:

conda update bioconductor-pmm

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pmm:<tag>

(see bioconductor-pmm/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-pmm/README.html)