recipe bioconductor-polyester

Simulate RNA-seq reads

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/polyester.html

License:

Artistic-2.0

Recipe:

/bioconductor-polyester/meta.yaml

This package can be used to simulate RNA-seq reads from differential expression experiments with replicates. The reads can then be aligned and used to perform comparisons of methods for differential expression.

package bioconductor-polyester

Versions:

1.30.0-0,  1.28.0-0,  1.26.0-1,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.18.0-0

Depends:

• bioconductor-biostrings >=2.62.0,<2.63.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-limma >=3.50.0,<3.51.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• bioconductor-zlibbioc >=1.40.0,<1.41.0

• r-base >=4.1,<4.2.0a0

• r-logspline

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-polyester

and update with:

conda update bioconductor-polyester

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-polyester:<tag>

(see bioconductor-polyester/tags for valid values for <tag>)

Download stats

Link to this page

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