bioconductor-probamr

downloads

Mapping PSMs back to genome. The package builds SAM file from shotgun proteomics data The package also provides function to prepare annotation from GTF file.

Home http://bioconductor.org/packages/release/bioc/html/proBAMr.html
Versions 1.8.0
License Artistic-2.0
Recipe https://github.com/bioconda/bioconda-recipes/tree/master/recipes/bioconductor-probamr

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-probamr

and update with:

conda update bioconductor-probamr

docker

A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-probamr.