recipe bioconductor-proteasy

Protease Mapping

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/proteasy.html

License:

GPL-3

Recipe:

/bioconductor-proteasy/meta.yaml

Retrieval of experimentally derived protease- and cleavage data derived from the MEROPS database. Proteasy contains functions for mapping peptide termini to known sites where a protease cleaves. This package also makes it possible to quickly look up known substrates based on a list of (potential) proteases, or vice versa - look up proteases based on a list of substrates.

package bioconductor-proteasy

Versions:

1.0.0-0

Depends:

• bioconductor-annotationfilter >=1.22.0,<1.23.0

• bioconductor-ensdb.hsapiens.v86 >=2.99.0,<2.100.0

• bioconductor-ensdb.mmusculus.v79 >=2.99.0,<2.100.0

• bioconductor-ensdb.rnorvegicus.v79 >=2.99.0,<2.100.0

• bioconductor-ensembldb >=2.22.0,<2.23.0

• bioconductor-rcpi >=1.34.0,<1.35.0

• r-base >=4.2,<4.3.0a0

• r-data.table

• r-stringr

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-proteasy

and update with:

conda update bioconductor-proteasy

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-proteasy:<tag>

(see bioconductor-proteasy/tags for valid values for <tag>)

Download stats

Link to this page

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