- recipe bioconductor-pvac
PCA-based gene filtering for Affymetrix arrays
- Homepage
- License
LGPL (>= 2.0)
- Recipe
- Links
biotools: pvac, doi: 10.1093/nar/gkr241
The package contains the function for filtering genes by the proportion of variation accounted for by the first principal component (PVAC).
- package bioconductor-pvac¶
-
- Versions
1.42.0-0
,1.40.0-0
,1.38.0-1
,1.38.0-0
,1.36.0-0
,1.34.0-0
,1.32.0-1
,1.30.0-0
,1.28.0-0
,1.42.0-0
,1.40.0-0
,1.38.0-1
,1.38.0-0
,1.36.0-0
,1.34.0-0
,1.32.0-1
,1.30.0-0
,1.28.0-0
,1.26.0-0
,1.24.0-0
- Depends
bioconductor-affy
>=1.72.0,<1.73.0
bioconductor-biobase
>=2.54.0,<2.55.0
r-base
>=4.1,<4.2.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-pvac
and update with:
conda update bioconductor-pvac
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-pvac:<tag>
(see bioconductor-pvac/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-pvac/README.html)