recipe bioconductor-pvac

PCA-based gene filtering for Affymetrix arrays

Homepage

https://bioconductor.org/packages/3.14/bioc/html/pvac.html

License

LGPL (>= 2.0)

Recipe

/bioconductor-pvac/meta.yaml

Links

biotools: pvac, doi: 10.1093/nar/gkr241

The package contains the function for filtering genes by the proportion of variation accounted for by the first principal component (PVAC).

package bioconductor-pvac

(downloads) docker_bioconductor-pvac

Versions
1.42.0-01.40.0-01.38.0-11.38.0-01.36.0-01.34.0-01.32.0-11.30.0-01.28.0-0

1.42.0-01.40.0-01.38.0-11.38.0-01.36.0-01.34.0-01.32.0-11.30.0-01.28.0-01.26.0-01.24.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-pvac

and update with:

conda update bioconductor-pvac

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-pvac:<tag>

(see bioconductor-pvac/tags for valid values for <tag>)

Download stats