recipe bioconductor-qpcrnorm

Data-driven normalization strategies for high-throughput qPCR data.

Homepage

https://bioconductor.org/packages/3.14/bioc/html/qpcrNorm.html

License

LGPL (>= 2)

Recipe

/bioconductor-qpcrnorm/meta.yaml

Links

biotools: qpcrnorm, doi: 10.1186/1471-2105-10-110

The package contains functions to perform normalization of high-throughput qPCR data. Basic functions for processing raw Ct data plus functions to generate diagnostic plots are also available.

package bioconductor-qpcrnorm

Versions

1.52.0-0,  1.50.0-0,  1.48.0-1,  1.48.0-0,  1.46.0-0,  1.44.0-0,  1.42.0-1,  1.40.0-1,  1.40.0-0, 

1.52.0-0,  1.50.0-0,  1.48.0-1,  1.48.0-0,  1.46.0-0,  1.44.0-0,  1.42.0-1,  1.40.0-1,  1.40.0-0,  1.38.0-0,  1.36.0-0,  1.34.0-0

Depends

• bioconductor-affy >=1.72.0,<1.73.0

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-limma >=3.50.0,<3.51.0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-qpcrnorm

and update with:

conda update bioconductor-qpcrnorm

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-qpcrnorm:<tag>

(see bioconductor-qpcrnorm/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-qpcrnorm/README.html)