recipe bioconductor-qplexanalyzer

Tools for quantitative proteomics data analysis generated from qPLEX-RIME method.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/qPLEXanalyzer.html

License

GPL-2

Recipe

/bioconductor-qplexanalyzer/meta.yaml

package bioconductor-qplexanalyzer

Versions

1.0.3-0

Depends

• bioconductor-biobase >=2.42.0,<2.43.0

• bioconductor-biocgenerics >=0.28.0,<0.29.0

• bioconductor-biostrings >=2.50.0,<2.51.0

• bioconductor-genomicranges >=1.34.0,<1.35.0

• bioconductor-iranges >=2.16.0,<2.17.0

• bioconductor-limma >=3.38.0,<3.39.0

• bioconductor-msnbase >=2.8.0,<2.9.0

• bioconductor-preprocesscore >=1.44.0,<1.45.0

• r-assertthat

• r-base >=3.5.1,<3.5.2.0a0

• r-dplyr

• r-ggdendro

• r-ggplot2

• r-magrittr

• r-purrr

• r-rcolorbrewer

• r-statmod

• r-stringr

• r-tibble

• r-tidyr

Required By

• bioconductor-qplexdata

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-qplexanalyzer

and update with:

conda update bioconductor-qplexanalyzer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-qplexanalyzer:<tag>

(see bioconductor-qplexanalyzer/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-qplexanalyzer/README.html)