recipe bioconductor-qplexanalyzer

Tools for qPLEX-RIME data analysis

Homepage

https://bioconductor.org/packages/3.14/bioc/html/qPLEXanalyzer.html

License

GPL-2

Recipe

/bioconductor-qplexanalyzer/meta.yaml

Tools for quantitative proteomics data analysis generated from qPLEX-RIME method.

package bioconductor-qplexanalyzer

Versions

1.12.0-0,  1.10.0-0,  1.8.2-0,  1.8.0-0,  1.6.0-0,  1.4.0-0,  1.2.0-1,  1.0.3-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-biocgenerics >=0.40.0,<0.41.0

• bioconductor-biostrings >=2.62.0,<2.63.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-limma >=3.50.0,<3.51.0

• bioconductor-msnbase >=2.20.0,<2.21.0

• bioconductor-preprocesscore >=1.56.0,<1.57.0

• r-assertthat

• r-base >=4.1,<4.2.0a0

• r-dplyr >=1.0.0

• r-ggdendro

• r-ggplot2

• r-magrittr

• r-purrr

• r-rcolorbrewer

• r-readr

• r-rlang

• r-scales

• r-stringr

• r-tibble

• r-tidyr

• r-tidyselect

Required By

• bioconductor-qplexdata

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-qplexanalyzer

and update with:

conda update bioconductor-qplexanalyzer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-qplexanalyzer:<tag>

(see bioconductor-qplexanalyzer/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-qplexanalyzer/README.html)