recipe bioconductor-qsmooth

Smooth quantile normalization

Homepage

https://bioconductor.org/packages/3.13/bioc/html/qsmooth.html

License

CC BY 4.0

Recipe

/bioconductor-qsmooth/meta.yaml

Smooth quantile normalization is a generalization of quantile normalization, which is average of the two types of assumptions about the data generation process: quantile normalization and quantile normalization between groups.

package bioconductor-qsmooth

Versions

1.8.0-0,  1.6.0-1,  1.6.0-0,  1.4.0-0,  1.2.0-0,  1.0.0-1

Depends

• bioconductor-summarizedexperiment >=1.22.0,<1.23.0

• bioconductor-sva >=3.40.0,<3.41.0

• r-base >=4.1,<4.2.0a0

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-qsmooth

and update with:

conda update bioconductor-qsmooth

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-qsmooth:<tag>

(see bioconductor-qsmooth/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-qsmooth/README.html)