Package Recipe 'bioconductor-qtlizer'

recipe bioconductor-qtlizer

Comprehensive QTL annotation of GWAS results

Homepage:: https://bioconductor.org/packages/3.16/bioc/html/Qtlizer.html
License:: GPL-3
Recipe:: /bioconductor-qtlizer/meta.yaml

This R package provides access to the Qtlizer web server. Qtlizer annotates lists of common small variants (mainly SNPs) and genes in humans with associated changes in gene expression using the most comprehensive database of published quantitative trait loci (QTLs).

package bioconductor-qtlizer¶

Versions:

1.12.0-0, 1.8.0-0, 1.6.0-0, 1.4.0-1, 1.4.0-0, 1.2.0-0, 1.0.0-0

Depends:

bioconductor-genomicranges >=1.50.0,<1.51.0
r-base >=4.2,<4.3.0a0
r-curl
r-httr
r-stringi

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-qtlizer

and update with:

conda update bioconductor-qtlizer

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-qtlizer:<tag>

(see bioconductor-qtlizer/tags for valid values for <tag>)

Download stats¶

Link to this page¶

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-qtlizer/README.html)