-
recipe
bioconductor-r3cpet
3CPET: Finding Co-factor Complexes in Chia-PET experiment using a Hierarchical Dirichlet Process
- Homepage
https://bioconductor.org/packages/3.12/bioc/html/R3CPET.html
- License
GPL (>=2)
- Recipe
The package provides a method to infer the set of proteins that are more probably to work together to maintain chormatin interaction given a ChIA-PET experiment results.
-
package
bioconductor-r3cpet
¶ -
- Versions
1.22.0-0
,1.20.0-0
,1.18.0-0
,1.16.0-1
,1.14.0-0
- Depends
bioconductor-biocgenerics
>=0.36.0,<0.37.0
bioconductor-genomeinfodb
>=1.26.0,<1.27.0
bioconductor-genomicranges
>=1.42.0,<1.43.0
bioconductor-ggbio
>=1.38.0,<1.39.0
bioconductor-iranges
>=2.24.0,<2.25.0
bioconductor-s4vectors
>=0.28.0,<0.29.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=7.5.0
liblapack
>=3.8.0,<4.0a0
libstdcxx-ng
>=7.5.0
r-base
>=4.0,<4.1.0a0
r-rcpp
>=0.10.4
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-r3cpet
and update with:
conda update bioconductor-r3cpet
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-r3cpet:<tag>
(see bioconductor-r3cpet/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-r3cpet/README.html)