recipe bioconductor-rankprod

Rank Product method for identifying differentially expressed genes with application in meta-analysis

Homepage

https://bioconductor.org/packages/3.10/bioc/html/RankProd.html

License

file LICENSE

Recipe

/bioconductor-rankprod/meta.yaml

Links

biotools: rankprod, doi: 10.1093/bioinformatics/btl476

Non-parametric method for identifying differentially expressed (up- or down- regulated) genes based on the estimated percentage of false predictions (pfp). The method can combine data sets from different origins (meta-analysis) to increase the power of the identification.

package bioconductor-rankprod

(downloads) docker_bioconductor-rankprod

Versions

3.12.0-0, 3.10.0-1, 3.10.0-0, 3.8.0-0, 3.6.0-0, 3.4.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rankprod

and update with:

conda update bioconductor-rankprod

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rankprod:<tag>

(see bioconductor-rankprod/tags for valid values for <tag>)