-
recipe
bioconductor-rcwl
An R interface to the Common Workflow Language
- Homepage
- License
GPL-2 | file LICENSE
- Recipe
The Common Workflow Language (CWL) is an open standard for development of data analysis workflows that is portable and scalable across different tools and working environments. Rcwl provides a simple way to wrap command line tools and build CWL data analysis pipelines programmatically within R. It increases the ease of usage, development, and maintenance of CWL pipelines.
-
package
bioconductor-rcwl
¶ -
- Versions
1.6.0-0
,1.4.2-0
- Depends
bioconductor-biocparallel
>=1.24.0,<1.25.0
bioconductor-s4vectors
>=0.28.0,<0.29.0
cwltool
>=1.0.2018
python
>=2.7
r-base
>=4.0,<4.1.0a0
- Required By
Installation
With an activated Bioconda channel (see 2. Set up channels), install with:
conda install bioconductor-rcwl
and update with:
conda update bioconductor-rcwl
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-rcwl:<tag>
(see bioconductor-rcwl/tags for valid values for
<tag>
)
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-rcwl/README.html)