recipe bioconductor-reactomegsa.data

Companion data package for the ReactomeGSA package

Homepage:

https://bioconductor.org/packages/3.16/data/experiment/html/ReactomeGSA.data.html

License:

Artistic-2.0

Recipe:

/bioconductor-reactomegsa.data/meta.yaml

Companion data sets to showcase the functionality of the ReactomeGSA package. This package contains proteomics and RNA-seq data of the melanoma B-cell induction study by Griss et al. and scRNA-seq data from Jerby-Arnon et al.

package bioconductor-reactomegsa.data

Versions:

1.11.0-0,  1.8.0-1,  1.8.0-0,  1.6.0-0,  1.4.0-1,  1.4.0-0,  1.2.0-0,  1.0.0-0

Depends:

• bioconductor-data-packages >=20221103

• bioconductor-edger >=3.40.0,<3.41.0

• bioconductor-limma >=3.54.0,<3.55.0

• bioconductor-reactomegsa >=1.12.0,<1.13.0

• curl

• r-base >=4.2,<4.3.0a0

• r-seurat

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-reactomegsa.data

and update with:

conda update bioconductor-reactomegsa.data

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-reactomegsa.data:<tag>

(see bioconductor-reactomegsa.data/tags for valid values for <tag>)

Download stats

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-reactomegsa.data/README.html)