recipe bioconductor-regsplice

L1-regularization based methods for detection of differential splicing

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/regsplice.html

License:

MIT + file LICENSE

Recipe:

/bioconductor-regsplice/meta.yaml

Links:

biotools: regsplice, doi: 10.1038/nmeth.3252

Statistical methods for detection of differential splicing (differential exon usage) in RNA-seq and exon microarray data, using L1-regularization (lasso) to improve power.

package bioconductor-regsplice

(downloads) docker_bioconductor-regsplice

Versions:
1.24.0-01.20.0-01.18.0-01.16.0-11.16.0-01.14.0-01.12.0-01.10.0-11.8.0-0

1.24.0-01.20.0-01.18.0-01.16.0-11.16.0-01.14.0-01.12.0-01.10.0-11.8.0-01.6.0-01.4.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-regsplice

and update with:

conda update bioconductor-regsplice

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-regsplice:<tag>

(see bioconductor-regsplice/tags for valid values for <tag>)

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