recipe bioconductor-reqon

Recalibrating Quality Of Nucleotides

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/ReQON.html

License:

GPL-2

Recipe:

/bioconductor-reqon/meta.yaml

Algorithm for recalibrating the base quality scores for aligned sequencing data in BAM format.

package bioconductor-reqon

Versions:

1.44.0-0,  1.40.0-0,  1.38.0-0,  1.36.0-1,  1.36.0-0,  1.32.0-0,  1.30.0-1,  1.28.0-0

Depends:

• bioconductor-rsamtools >=2.14.0,<2.15.0

• bioconductor-seqbias >=1.46.0,<1.47.0

• openjdk

• r-base >=4.2,<4.3.0a0

• r-rjava

Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-reqon

and update with:

conda update bioconductor-reqon

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-reqon:<tag>

(see bioconductor-reqon/tags for valid values for <tag>)

Download stats

Link to this page

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