recipe bioconductor-restfulse

Access matrix-like HDF5 server content or BigQuery content through a SummarizedExperiment interface

Homepage

https://bioconductor.org/packages/3.14/bioc/html/restfulSE.html

License

Artistic-2.0

Recipe

/bioconductor-restfulse/meta.yaml

This package provides functions and classes to interface with remote data stores by operating on SummarizedExperiment-like objects.

package bioconductor-restfulse

Versions

1.16.0-0,  1.13.1-0,  1.12.0-1,  1.12.0-0,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.4.0-0

Depends

• bioconductor-annotationdbi >=1.56.0,<1.57.0

• bioconductor-annotationhub >=3.2.0,<3.3.0

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-delayedarray >=0.20.0,<0.21.0

• bioconductor-experimenthub >=2.2.0,<2.3.0

• bioconductor-go.db >=3.14.0,<3.15.0

• bioconductor-rhdf5client >=1.16.0,<1.17.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• bioconductor-summarizedexperiment >=1.24.0,<1.25.0

• r-base >=4.1,<4.2.0a0

• r-bigrquery

• r-dbi

• r-dplyr >=0.7.1

• r-magrittr

• r-reshape2

• r-rlang

Required By

• bioconductor-tenxplore

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-restfulse

and update with:

conda update bioconductor-restfulse

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-restfulse:<tag>

(see bioconductor-restfulse/tags for valid values for <tag>)

Download stats

Link to this page

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