recipe bioconductor-restfulse

Access matrix-like HDF5 server content or BigQuery content through a SummarizedExperiment interface

Homepage

https://bioconductor.org/packages/3.11/bioc/html/restfulSE.html

License

Artistic-2.0

Recipe

/bioconductor-restfulse/meta.yaml

This package provides functions and classes to interface with remote data stores by operating on SummarizedExperiment-like objects.

package bioconductor-restfulse

Versions

1.10.0-0, 1.8.0-0, 1.6.0-1, 1.4.0-0

Depends

• bioconductor-annotationdbi >=1.50.0,<1.51.0

• bioconductor-annotationhub >=2.20.0,<2.21.0

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-delayedarray >=0.14.0,<0.15.0

• bioconductor-experimenthub >=1.14.0,<1.15.0

• bioconductor-go.db >=3.11.0,<3.12.0

• bioconductor-rhdf5client >=1.10.0,<1.11.0

• bioconductor-s4vectors >=0.26.0,<0.27.0

• bioconductor-summarizedexperiment >=1.18.0,<1.19.0

• r-base >=4.0,<4.1.0a0

• r-bigrquery

• r-dbi

• r-dplyr >=0.7.1

• r-magrittr

• r-reshape2

• r-rlang

Required By

• bioconductor-tenxplore

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-restfulse

and update with:

conda update bioconductor-restfulse

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-restfulse:<tag>

(see bioconductor-restfulse/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-restfulse/README.html)