recipe bioconductor-restfulse

Access matrix-like HDF5 server content or BigQuery content through a SummarizedExperiment interface

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/restfulSE.html

License:

Artistic-2.0

Recipe:

/bioconductor-restfulse/meta.yaml

This package provides functions and classes to interface with remote data stores by operating on SummarizedExperiment-like objects.

package bioconductor-restfulse

Versions:

1.20.0-0,  1.16.0-0,  1.13.1-0,  1.12.0-1,  1.12.0-0,  1.10.0-0,  1.8.0-0,  1.6.0-1,  1.4.0-0

Depends:

• bioconductor-annotationdbi >=1.60.0,<1.61.0

• bioconductor-annotationhub >=3.6.0,<3.7.0

• bioconductor-biobase >=2.58.0,<2.59.0

• bioconductor-delayedarray >=0.24.0,<0.25.0

• bioconductor-experimenthub >=2.6.0,<2.7.0

• bioconductor-go.db >=3.16.0,<3.17.0

• bioconductor-rhdf5client >=1.20.0,<1.21.0

• bioconductor-s4vectors >=0.36.0,<0.37.0

• bioconductor-summarizedexperiment >=1.28.0,<1.29.0

• r-base >=4.2,<4.3.0a0

• r-bigrquery

• r-dbi

• r-dplyr >=0.7.1

• r-magrittr

• r-reshape2

• r-rlang

Required By:

• bioconductor-tenxplore

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-restfulse

and update with:

conda update bioconductor-restfulse

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-restfulse:<tag>

(see bioconductor-restfulse/tags for valid values for <tag>)

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Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-restfulse/README.html)