recipe bioconductor-rgadem

de novo motif discovery

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/rGADEM.html

License:

Artistic-2.0

Recipe:

/bioconductor-rgadem/meta.yaml

Links:

biotools: rgadem, doi: 10.1371/journal.pone.0016432

rGADEM is an efficient de novo motif discovery tool for large-scale genomic sequence data. It is an open-source R package, which is based on the GADEM software.

package bioconductor-rgadem

(downloads) docker_bioconductor-rgadem

Versions:
2.46.0-02.42.0-22.42.0-12.42.0-02.40.0-02.38.0-12.38.0-02.36.0-02.34.0-0

2.46.0-02.42.0-22.42.0-12.42.0-02.40.0-02.38.0-12.38.0-02.36.0-02.34.0-02.32.0-12.30.0-02.28.0-02.26.0-02.24.0-02.22.0-0

Depends:
Required By:

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rgadem

and update with:

conda update bioconductor-rgadem

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rgadem:<tag>

(see bioconductor-rgadem/tags for valid values for <tag>)

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