- recipe bioconductor-rgenometracks
Integerated visualization of epigenomic data
- Homepage:
https://bioconductor.org/packages/3.16/bioc/html/rGenomeTracks.html
- License:
GPL-3
- Recipe:
rGenomeTracks package leverages the power of pyGenomeTracks software with the interactivity of R. pyGenomeTracks is a python software that offers robust method for visualizing epigenetic data files like narrowPeak, Hic matrix, TADs and arcs, however though, here is no way currently to use it within R interactive session. rGenomeTracks wrapped the whole functionality of pyGenomeTracks with additional utilites to make to more pleasant for R users.
- package bioconductor-rgenometracks¶
-
- Versions:
1.4.0-0
,1.0.0-0
- Depends:
bioconductor-rgenometracksdata
>=0.99.0,<0.100.0
r-base
>=4.2,<4.3.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-rgenometracks
and update with:
conda update bioconductor-rgenometracks
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-rgenometracks:<tag>
(see bioconductor-rgenometracks/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-rgenometracks/README.html)