recipe bioconductor-ribodipa

Differential pattern analysis for Ribo-seq data

Homepage

https://bioconductor.org/packages/3.14/bioc/html/RiboDiPA.html

License

LGPL (>= 3)

Recipe

/bioconductor-ribodipa/meta.yaml

This package performs differential pattern analysis for Ribo-seq data. It identifies genes with significantly different patterns in the ribosome footprint between two conditions. RiboDiPA contains five major components including bam file processing, P-site mapping, data binning, differential pattern analysis and footprint visualization.

package bioconductor-ribodipa

(downloads) docker_bioconductor-ribodipa

Versions

1.2.0-01.0.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-ribodipa

and update with:

conda update bioconductor-ribodipa

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-ribodipa:<tag>

(see bioconductor-ribodipa/tags for valid values for <tag>)

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