- recipe bioconductor-rnamodr.alkanilineseq
Detection of m7G, m3C and D modification by AlkAnilineSeq
- Homepage:
https://bioconductor.org/packages/3.14/bioc/html/RNAmodR.AlkAnilineSeq.html
- License:
Artistic-2.0
- Recipe:
RNAmodR.AlkAnilineSeq implements the detection of m7G, m3C and D modifications on RNA from experimental data generated with the AlkAnilineSeq protocol. The package builds on the core functionality of the RNAmodR package to detect specific patterns of the modifications in high throughput sequencing data.
- package bioconductor-rnamodr.alkanilineseq¶
-
- Versions:
1.8.0-0
,1.6.0-0
,1.4.0-1
,1.4.0-0
,1.2.0-0
,1.0.0-0
- Depends:
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-genomicranges
>=1.46.0,<1.47.0
bioconductor-gviz
>=1.38.0,<1.39.0
bioconductor-iranges
>=2.28.0,<2.29.0
bioconductor-rnamodr
>=1.8.0,<1.9.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
r-base
>=4.1,<4.2.0a0
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-rnamodr.alkanilineseq
and update with:
conda update bioconductor-rnamodr.alkanilineseq
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-rnamodr.alkanilineseq:<tag>
(see bioconductor-rnamodr.alkanilineseq/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-rnamodr.alkanilineseq/README.html)