recipe bioconductor-rnaseqsamplesize

RnaSeqSampleSize

Homepage

https://bioconductor.org/packages/3.14/bioc/html/RnaSeqSampleSize.html

License

GPL (>= 2)

Recipe

/bioconductor-rnaseqsamplesize/meta.yaml

RnaSeqSampleSize package provides a sample size calculation method based on negative binomial model and the exact test for assessing differential expression analysis of RNA-seq data. It controls FDR for multiple testing and utilizes the average read count and dispersion distributions from real data to estimate a more reliable sample size. It is also equipped with several unique features, including estimation for interested genes or pathway, power curve visualization, and parameter optimization.

package bioconductor-rnaseqsamplesize

(downloads) docker_bioconductor-rnaseqsamplesize

Versions

2.4.0-02.2.0-02.0.0-22.0.0-11.17.0-11.16.0-11.14.0-01.12.0-2

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rnaseqsamplesize

and update with:

conda update bioconductor-rnaseqsamplesize

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rnaseqsamplesize:<tag>

(see bioconductor-rnaseqsamplesize/tags for valid values for <tag>)

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