recipe bioconductor-rnbeads

RnBeads facilitates comprehensive analysis of various types of DNA methylation data at the genome scale.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/RnBeads.html

License

GPL-3

Recipe

/bioconductor-rnbeads/meta.yaml

package bioconductor-rnbeads

Versions

2.2.0-1, 2.0.0-0, 1.12.1-0, 1.10.8-0

Depends

• bioconductor-biocgenerics >=0.30.0,<0.31.0

• bioconductor-genomicranges >=1.36.0,<1.37.0

• bioconductor-illuminaio >=0.26.0,<0.27.0

• bioconductor-iranges >=2.18.0,<2.19.0

• bioconductor-limma >=3.40.0,<3.41.0

• bioconductor-methylumi >=2.30.0,<2.31.0

• bioconductor-s4vectors >=0.22.0,<0.23.0

• r-base >=3.6,<3.7.0a0

• r-cluster

• r-ff

• r-fields

• r-ggplot2 >=0.9.2

• r-gplots

• r-gridextra

• r-mass

• r-matrixstats

• r-plyr

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rnbeads

and update with:

conda update bioconductor-rnbeads

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rnbeads:<tag>

(see bioconductor-rnbeads/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rnbeads/README.html)