recipe bioconductor-rnbeads

RnBeads

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/RnBeads.html

License:

GPL-3

Recipe:

/bioconductor-rnbeads/meta.yaml

RnBeads facilitates comprehensive analysis of various types of DNA methylation data at the genome scale.

package bioconductor-rnbeads

Versions:

2.12.2-0,  2.10.0-0,  2.8.1-0,  2.8.0-0,  2.4.0-0,  2.2.0-1,  2.0.0-0,  1.12.1-0,  1.10.8-0

Depends:

• bioconductor-biocgenerics >=0.40.0,<0.41.0

• bioconductor-genomicranges >=1.46.0,<1.47.0

• bioconductor-illuminaio >=0.36.0,<0.37.0

• bioconductor-iranges >=2.28.0,<2.29.0

• bioconductor-limma >=3.50.0,<3.51.0

• bioconductor-methylumi >=2.40.0,<2.41.0

• bioconductor-s4vectors >=0.32.0,<0.33.0

• r-base >=4.1,<4.2.0a0

• r-cluster

• r-ff

• r-fields

• r-ggplot2 >=0.9.2

• r-gplots

• r-gridextra

• r-mass

• r-matrixstats

• r-plyr

Required By:

• bioconductor-magar

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rnbeads

and update with:

conda update bioconductor-rnbeads

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rnbeads:<tag>

(see bioconductor-rnbeads/tags for valid values for <tag>)

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Link to this page

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[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rnbeads/README.html)