recipe bioconductor-roar

Identify preferential usage of APA sites, comparing two biological conditions, starting from known alternative sites and alignments obtained from standard RNA-seq experiments.

Homepage

https://bioconductor.org/packages/3.9/bioc/html/roar.html

License

GPL-3

Recipe

/bioconductor-roar/meta.yaml

Links

biotools: roar, doi: 10.1038/nmeth.3252

package bioconductor-roar

(downloads) docker_bioconductor-roar

Versions

1.18.0-0, 1.16.0-0, 1.14.0-0, 1.12.0-0, 1.10.0-0

Depends
Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-roar

and update with:

conda update bioconductor-roar

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-roar:<tag>

(see bioconductor-roar/tags for valid values for <tag>)