recipe bioconductor-rols

An R interface to the Ontology Lookup Service

Homepage

https://bioconductor.org/packages/3.14/bioc/html/rols.html

License

GPL-2

Recipe

/bioconductor-rols/meta.yaml

Links

biotools: rols, doi: 10.1038/nmeth.3252

The rols package is an interface to the Ontology Lookup Service (OLS) to access and query hundred of ontolgies directly from R.

package bioconductor-rols

Versions

2.22.0-0,  2.20.0-0,  2.18.2-0,  2.18.0-0,  2.16.1-0,  2.14.0-0,  2.12.0-1,  2.10.1-0,  2.10.0-0, 

2.22.0-0,  2.20.0-0,  2.18.2-0,  2.18.0-0,  2.16.1-0,  2.14.0-0,  2.12.0-1,  2.10.1-0,  2.10.0-0,  2.8.2-0,  2.6.0-0,  2.4.0-0

Depends

• bioconductor-biobase >=2.54.0,<2.55.0

• bioconductor-biocgenerics >=0.40.0,<0.41.0

• r-base >=4.1,<4.2.0a0

• r-httr

• r-jsonlite

• r-progress

Required By

• bioconductor-spatialheatmap

• bioconductor-struct

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rols

and update with:

conda update bioconductor-rols

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rols:<tag>

(see bioconductor-rols/tags for valid values for <tag>)

Download stats

Link to this page

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