recipe bioconductor-rols

An R interface to the Ontology Lookup Service

Homepage

https://bioconductor.org/packages/3.11/bioc/html/rols.html

License

GPL-2

Recipe

/bioconductor-rols/meta.yaml

Links

biotools: rols, doi: 10.1038/nmeth.3252

The rols package is an interface to the Ontology Lookup Service (OLS) to access and query hundred of ontolgies directly from R.

package bioconductor-rols

Versions

2.16.1-0, 2.14.0-0, 2.12.0-1, 2.10.1-0, 2.10.0-0, 2.8.2-0, 2.6.0-0, 2.4.0-0

Depends

• bioconductor-biobase >=2.48.0,<2.49.0

• bioconductor-biocgenerics >=0.34.0,<0.35.0

• r-base >=4.0,<4.1.0a0

• r-httr

• r-jsonlite

• r-progress

Required By

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rols

and update with:

conda update bioconductor-rols

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rols:<tag>

(see bioconductor-rols/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rols/README.html)