recipe bioconductor-rots

Reproducibility-Optimized Test Statistic

Homepage:

https://bioconductor.org/packages/3.16/bioc/html/ROTS.html

License:

GPL (>= 2)

Recipe:

/bioconductor-rots/meta.yaml

Links:

biotools: rots, doi: 10.1109/tcbb.2007.1078

Calculates the Reproducibility-Optimized Test Statistic (ROTS) for differential testing in omics data.

package bioconductor-rots

Versions:

1.26.0-1,  1.26.0-0,  1.22.0-2,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0, 

1.26.0-1,  1.26.0-0,  1.22.0-2,  1.22.0-1,  1.22.0-0,  1.20.0-0,  1.18.0-1,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.0-1,  1.10.1-0,  1.10.0-0,  1.8.0-0,  1.6.0-0,  1.4.0-0,  1.0.0-0

Depends:

• bioconductor-biobase >=2.58.0,<2.59.0

• libblas >=3.9.0,<4.0a0

• libgcc-ng >=12

• liblapack >=3.9.0,<4.0a0

• libstdcxx-ng >=12

• r-base >=4.2,<4.3.0a0

• r-rcpp

Required By:

• bioconductor-peca

• bioconductor-rolde

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rots

and update with:

conda update bioconductor-rots

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rots:<tag>

(see bioconductor-rots/tags for valid values for <tag>)

Download stats

Link to this page

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