recipe bioconductor-rpx

R Interface to the ProteomeXchange Repository

Homepage:

https://bioconductor.org/packages/3.14/bioc/html/rpx.html

License:

GPL-2

Recipe:

/bioconductor-rpx/meta.yaml

Links:

biotools: rpx, doi: 10.1038/nbt.2839

The rpx package implements an interface to proteomics data submitted to the ProteomeXchange consortium.

package bioconductor-rpx

Versions:

2.1.12-0,  2.0.0-0,  1.26.2-0,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.1-0, 

2.1.12-0,  2.0.0-0,  1.26.2-0,  1.26.0-0,  1.24.0-0,  1.22.0-0,  1.20.0-1,  1.20.0-0,  1.18.1-0,  1.18.0-0,  1.16.0-0,  1.14.0-0,  1.12.1-0

Depends:

• bioconductor-biocfilecache >=2.2.0,<2.3.0

• r-base >=4.1,<4.2.0a0

• r-curl

• r-jsonlite

• r-rcurl

• r-xml2

Required By:

• bioconductor-mbqn

Installation

With an activated Bioconda channel (see set-up-channels), install with:

conda install bioconductor-rpx

and update with:

conda update bioconductor-rpx

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rpx:<tag>

(see bioconductor-rpx/tags for valid values for <tag>)

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