recipe bioconductor-rpx

R Interface to the ProteomeXchange Repository

Homepage

https://bioconductor.org/packages/3.10/bioc/html/rpx.html

License

GPL-2

Recipe

/bioconductor-rpx/meta.yaml

Links

biotools: rpx, doi: 10.1038/nbt.2839

The rpx package implements an interface to proteomics data submitted to the ProteomeXchange consortium.

package bioconductor-rpx

Versions

1.22.0-0, 1.20.0-1, 1.20.0-0, 1.18.1-0, 1.18.0-0, 1.16.0-0, 1.14.0-0, 1.12.1-0

Depends

• r-base >=3.6,<3.7.0a0

• r-rcurl

• r-xml2

Required By

• bioconductor-proteoqc

Installation

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-rpx

and update with:

conda update bioconductor-rpx

or use the docker container:

docker pull quay.io/biocontainers/bioconductor-rpx:<tag>

(see bioconductor-rpx/tags for valid values for <tag>)

Link to this page

Render an badge with the following MarkDown:

[![install with bioconda](https://img.shields.io/badge/install%20with-bioconda-brightgreen.svg?style=flat)](http://bioconda.github.io/recipes/bioconductor-rpx/README.html)