- recipe bioconductor-rqc
Quality Control Tool for High-Throughput Sequencing Data
- Homepage:
- License:
GPL (>= 2)
- Recipe:
Rqc is an optimised tool designed for quality control and assessment of high-throughput sequencing data. It performs parallel processing of entire files and produces a report which contains a set of high-resolution graphics.
- package bioconductor-rqc¶
-
- Versions:
1.28.0-1
,1.28.0-0
,1.26.0-0
,1.24.0-1
,1.24.0-0
,1.22.0-0
,1.20.0-0
,1.18.0-1
,1.16.2-0
- Depends:
bioconductor-biocgenerics
>=0.40.0,<0.41.0
bioconductor-biocparallel
>=1.28.0,<1.29.0
bioconductor-biocstyle
>=2.22.0,<2.23.0
bioconductor-biostrings
>=2.62.0,<2.63.0
bioconductor-biovizbase
>=1.42.0,<1.43.0
bioconductor-genomicalignments
>=1.30.0,<1.31.0
bioconductor-genomicfiles
>=1.30.0,<1.31.0
bioconductor-iranges
>=2.28.0,<2.29.0
bioconductor-rsamtools
>=2.10.0,<2.11.0
bioconductor-s4vectors
>=0.32.0,<0.33.0
bioconductor-shortread
>=1.52.0,<1.53.0
libblas
>=3.8.0,<4.0a0
libgcc-ng
>=10.3.0
liblapack
>=3.8.0,<4.0a0
libstdcxx-ng
>=10.3.0
r-base
>=4.1,<4.2.0a0
r-knitr
>=1.7
r-rcpp
>=0.11.6
- Required By:
Installation
With an activated Bioconda channel (see set-up-channels), install with:
conda install bioconductor-rqc
and update with:
conda update bioconductor-rqc
or use the docker container:
docker pull quay.io/biocontainers/bioconductor-rqc:<tag>
(see bioconductor-rqc/tags for valid values for
<tag>
)
Download stats¶
Link to this page¶
Render an badge with the following MarkDown:
[](http://bioconda.github.io/recipes/bioconductor-rqc/README.html)